
1.Molecular Microscopy and Spectroscopy, Istituto Italiano di Tecnologia, Genoa, Italy
2.Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy
3.Nanoscopy and NIC@IIT, Istituto Italiano di Tecnologia, Genoa, Italy
4.Dipartimento di Fisica e Astronomia, Università di Catania, Catania, Italy
Giuseppe Vicidomini (giuseppe.vicidomini@iit.it)
Published:2021,
Published Online:05 February 2021,
Received:23 July 2020,
Revised:17 December 2020,
Accepted:14 January 2021
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Slenders, E. et al. Confocal-based fluorescence fluctuation spectroscopy with a SPAD array detector. Light: Science & Applications, 10, 289-300 (2021).
Slenders, E. et al. Confocal-based fluorescence fluctuation spectroscopy with a SPAD array detector. Light: Science & Applications, 10, 289-300 (2021). DOI: 10.1038/s41377-021-00475-z.
The combination of confocal laser-scanning microscopy (CLSM) and fluorescence fluctuation spectroscopy (FFS) is a powerful tool in studying fast
sub-resolution biomolecular processes in living cells. A detector array can further enhance CLSM-based FFS techniques
as it allows the simultaneous acquisition of several samples–essentially images—of the CLSM detection volume. However
the detector arrays that have previously been proposed for this purpose require tedious data corrections and preclude the combination of FFS with single-photon techniques
such as fluorescence lifetime imaging. Here
we solve these limitations by integrating a novel single-photon-avalanche-diode (SPAD) array detector in a CLSM system. We validate this new implementation on a series of FFS analyses: spot-variation fluorescence correlation spectroscopy
pair-correlation function analysis
and image-derived mean squared displacement analysis. We predict that the unique combination of spatial and temporal information provided by our detector will make the proposed architecture the method of choice for CLSM-based FFS.
Digman, M. A.&Gratton, E. Lessons in fluctuation correlation spectroscopy.Annu. Rev. Phys. Chem.62, 645–668 (2011)..
Magde, D., Elson, E.&Webb, W. W. Thermodynamic fluctuations in a reacting system-measurement by fluorescence correlation spectroscopy.Phys. Rev. Lett.29, 705–708 (1972)..
Elson, E. L.&Magde, D. Fluorescence correlation spectroscopy. I. Conceptual basis and theory.Biopolymers13, 1–27 (1974)..
Petersen, N. O. Scanning fluorescence correlation spectroscopy. I. Theory and simulation of aggregation measurements.Biophys. J.49, 809–815 (1986)..
Ruan, Q. Q. et al. Spatial-temporal studies of membrane dynamics: scanning fluorescence correlation spectroscopy (SFCS).Biophys. J.87, 1260–1267 (2004)..
Sisan, D. R. et al. Spatially resolved fluorescence correlation spectroscopy using a spinning disk confocal microscope.Biophys. J.91, 4241–4252 (2006)..
Ries, J., Chiantia, S.&Schwille, P. Accurate determination of membrane dynamics with line-scan FCS.Biophys. J.96, 1999–2008 (2009)..
Digman, M. A.&Gratton, E. Imaging barriers to diffusion by pair correlation functions.Biophys. J.97, 665–673 (2009)..
Digman, M. A. et al. Measuring fast dynamics in solutions and cells with a laser scanning microscope.Biophys. J.89, 1317–1327 (2005)..
Hebert, B., Costantino, S.&Wiseman, P. W. Spatiotemporal image correlation spectroscopy (STICS) theory, verification, and application to protein velocity mapping in living CHO cells.Biophys. J.88, 3601–3614 (2005)..
Di Rienzo, C. et al. Fast spatiotemporal correlation spectroscopy to determine protein lateral diffusion laws in live cell membranes.Proc. Natl Acad. Sci. USA110, 12307–12312 (2013)..
Hedde, P. N. et al. Pair correlation analysis maps the dynamic two-dimensional organization of natural killer cell receptors at the synapse.ACS Nano13, 14274–14282 (2019)..
Eggeling, C. et al. Direct observation of the nanoscale dynamics of membrane lipids in a living cell.Nature457, 1159–1162 (2009)..
Huff, J. The airyscan detector from ZEISS:confocal imaging with improved signal-to-noise ratio and super-resolution.Nat. Methods12, i–ii (2015)..
Scipioni, L. et al. Comprehensive correlation analysis for super-resolution dynamic fingerprinting of cellular compartments using the zeiss airyscan detector.Nat. Commun.9, 5120 (2018)..
Vicidomini, G. et al. Sharper low-power STED nanoscopy by time gating.Nat. Methods8, 571–573 (2011)..
Vicidomini, G. et al. STED-FLCS: an advanced tool to reveal spatiotemporal heterogeneity of molecular membrane dynamics.Nano Lett.15, 5912–5918 (2015)..
Lanzanò, L. et al. Measurement of nanoscale three-dimensional diffusion in the interior of living cells by STED-FCS.Nat. Commun.8, 65 (2017)..
Kapusta, P. et al. Fluorescence lifetime correlation spectroscopy.J. Fluorescence17, 43–48 (2007)..
Böhmer, M. et al. Time-resolved fluorescence correlation spectroscopy.Chem. Phys. Lett.353, 439–445 (2002)..
Torres, T.&Levitus, M. Measuring conformational dynamics: a new FCS-FRET approach.J. Phys. Chem. B111, 7392–7400 (2007)..
Buttafava, M. et al. SPAD-based asynchronous-readout array detectors for image-scanning microscopy.Optica7, 755–765 (2020)..
Castello, M. et al. A robust and versatile platform for image scanning microscopy enabling super-resolution FLIM.Nat. Methods16, 175–178 (2019)..
Gösch, M. et al. Parallel single molecule detection with a fully integrated single-photon 2x2 CMOS detector array.J. Biomed. Opt.9, 913–921 (2004)..
Rech, I. et al. Multipixel single-photon avalanche diode array for parallel photon counting applications.J. Mod. Opt.56, 326–333 (2009)..
Colyer, R. A. et al. High-throughput FCS using an LCOS spatial light modulator and an 8 x 1 SPAD array.Biomed. Opt. Express1, 1408–1431 (2010)..
Kloster-Landsberg, M. et al. Note: multi-confocal fluorescence correlation spectroscopy in living cells using a complementary metal oxide semiconductor-single photon avalanche diode array.Rev. Sci. Instrum.84, 076105 (2013)..
Krmpot, A. J. et al. Functional fluorescence microscopy imaging: quantitative scanning-free confocal fluorescence microscopy for the characterization of fast dynamic processes in live cells.Anal. Chem.91, 11129–11137 (2019)..
Buchholz, J. et al. Widefield high frame rate single-photon SPAD imagers for SPIM-FCS.Biophys. J.114, 2455–2464 (2018)..
Schwille, P., Oehlenschlager, F.&Walter, N. G. Quantitative hybridization kinetics of DNA probes to RNA in solution followed by diffusional fluorescence correlation analysis.Biochemistry35, 10182–10193 (1996)..
Scipioni, L. et al. Local raster image correlation spectroscopy generates high-resolution intracellular diffusion maps.Commun. Biol.1, 10 (2018)..
Dertinger, T. et al. Two-focus fluorescence correlation spectroscopy: a new tool for accurate and absolute diffusion measurements.ChemPhysChem8, 433–443 (2007)..
Ries, J. et al. A comprehensive framework for fluorescence cross-correlation spectroscopy.N. J. Phys.12, 113009 (2010)..
Schneider, F. et al. High photon count rates improve the quality of super-resolution fluorescence fluctuation spectroscopy.J. Phys. D53, 164003 (2020)..
Ta, H. et al. Experimental approach to extend the range for counting fluorescent molecules based on photon-antibunching.Phys. Chem. Chem. Phys.12, 10295–10300 (2010)..
Bruschini, C. et al. Single-photon avalanche diode imagers in biophotonics: review and outlook.Light Sci. Appl.8, 87 (2019)..
Ulku, A. C. et al. A 512 × 512 SPAD image sensor with integrated gating for widefield FLIM.IEEE J. Sel. Top. Quantum Electron.25, 6801212 (2019)..
Choi, J. et al. Fully integrated time-gated 3D fluorescence imager for deep neural imaging.IEEE Trans. Biomed. Circuits Syst.14, 636–645 (2020)..
Lagarto, J. L. et al. Real-time multispectral fluorescence lifetime imaging using single photon avalanche diode arrays.Sci. Rep.10, 8116 (2020)..
Zhang, C. et al. A 30-frames/s, 252 × 144 SPAD Flash LiDAR with 1728 Dual-Clock 48.8-ps TDCs, and pixel-wise integrated histogramming.IEEE J. Solid State Circuits54, 1137–1151 (2019)..
Ghosh, A. et al. Fluorescence lifetime correlation spectroscopy: basics and applications.Methods140-141, 32–39 (2018)..
Tortarolo,G. et al. Synergic combination of stimulated emission depletion microscopy with image scanning microscopy to reduce light dosage.bioRxiv, 741389 (2019).
Koho, S. V. et al. Two-photon image-scanning microscopy with SPAD array and blind image reconstruction.Biomed. Opt. Express11, 2905–2924 (2020)..
Müller, P. Python multipletau algorithm. Python, version 0.3.3,https://pypi.org/project/multipletau/https://pypi.org/project/multipletau/(2012).
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